Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGTGGAGGAAGAGGGCAGCTC&GGCAGCGTCTCCTTCTCCGCTT
.(((((((((.((((((.(((.&))).)).)))).))))))))).
Details
MiRNAhsa-miR-6880-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site627,649
Score0.923
Seed1
Au0.397
Energy-23.2
Binding len22
Me-6.618
Phylopstem1.2274002222222227
Phylopflank1.2947092262500002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure