Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGAGATGCTCAGGCAGAT&TCCAAGCCTCAGTCCCAGCCAGCCATGGCAGCGTCTCCTTC
((((((((((((((((....&.))).))..))))))))))).
Details
MiRNAhsa-miR-6888-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site601,642
Score1.0
Seed1
Au0.397
Energy-22.3
Binding len21
Me-3.938
Phylopstem0.873881752631579
Phylopflank1.2891591949999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure