Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGAGGTCAAGGCTGCAGT&GCAGCCTCCAGGCCTTTGTGGCTGTAGCCGCCCGGG
((((((((((.(((((((...&)))))))...)))))...............))))).
Details
MiRNAhsa-miR-1273h-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site660,696
Score0.846
Seed1
Au0.368
Energy-25.9
Binding len36
Me-6.762
Phylopstem1.6962402120000002
Phylopflank1.4961092949999997
Longest consecutive pairings7
Position of longest consecutive pairings29
Pairings in 3prime end5
PositionCDS
2D Structure