Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGCGCCGCGCTCCCGCCCGC&GTGGGCAGAGATTCCACCAGGACTGGTGCAAGGCGCA
...((((((((((.((((((((&)))))).............))...)))))..))))).
Details
MiRNAhsa-miR-9899
RefseqIDNM_016584
GeneSymbolIL23A
Binding site92,129
Score0.846
Seed0
Au0.456
Energy-25.4
Binding len37
Me-7.371
Phylopstem0.5677930666666667
Phylopflank0.69666224575
Longest consecutive pairings6
Position of longest consecutive pairings31
Pairings in 3prime end8
Position5UTR
2D Structure