Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTGCCATTCTGAGGGCCAGGAGT&ACCCTGAGTCCCTAAAGGCAGCAGCTCAAGGATGGCACTC
.(((((((((((((((((((((.((&)))))).))))..............))).)))))))))).
Details
MiRNAhsa-miR-3085-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site716,756
Score0.846
Seed1
Au0.426
Energy-27.7
Binding len40
Me-3.793
Phylopstem0.7647008162162162
Phylopflank0.9156968225
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure