Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGAGGTTCTAATGGTCCAGGGTTA&TAGCCCTGTGGGCCAGCTTCATGCCTCCCTACTGGGCCTCA
..(((((((...(((((((((((((&)))))))..))))))..................))))))).
Details
MiRNAhsa-miR-12127
RefseqIDNM_016584
GeneSymbolIL23A
Binding site514,555
Score0.846
Seed1
Au0.338
Energy-26.3
Binding len41
Me-12.371
Phylopstem0.6508640666666667
Phylopflank1.6094965575000002
Longest consecutive pairings7
Position of longest consecutive pairings34
Pairings in 3prime end8
PositionCDS
2D Structure