Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTAATATCTGTAAGACGGCAGCTACAGCAGG
((((((((((.((((((((((&)))))))............))).))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016589
GeneSymbolTIMMDC1
Binding site404,441
Score0.846
Seed1
Au0.485
Energy-22.5
Binding len37
Me-6.762
Phylopstem1.4732009636363634
Phylopflank2.1076498500000005
Longest consecutive pairings7
Position of longest consecutive pairings30
Pairings in 3prime end8
PositionCDS
2D Structure