Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATTTCCCCGAGTCTTTGCTGCCGAAGCTGTGAC
((((((((.((((.((((((.&.)))))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016589
GeneSymbolTIMMDC1
Binding site236,273
Score1.0
Seed1
Au0.426
Energy-22.8
Binding len22
Me-5.851
Phylopstem1.05355775
Phylopflank0.311217725
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure