Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCAACCCAGTGTCTCCCTGACCGTGGCTGCGC
.(((((((((((((...(((.&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016602
GeneSymbolCCR10
Binding site143,180
Score0.846
Seed1
Au0.309
Energy-24.2
Binding len18
Me-4.762
Phylopstem-0.14353385384615394
Phylopflank0.28276903374999995
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure