Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGTGGCAGCTCAGCTGCC
..(((((((.((((((..(((&))).....))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016605
GeneSymbolFAM53C
Binding site3925,3947
Score0.846
Seed1
Au0.368
Energy-20.9
Binding len22
Me-6.2
Phylopstem2.5886926142857143
Phylopflank3.0233128375000007
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure