Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCAGAGTTTTCAACGGTGCTTATAGCTGCCAGCTGGAT
.(.((((((((((((((((..&.))))))))))).))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016614
GeneSymbolTDP2
Binding site1353,1396
Score0.923
Seed0
Au0.515
Energy-23.7
Binding len21
Me-5.351
Phylopstem4.857708411764706
Phylopflank2.98278404375
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure