Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGTCAACCAGTTGTAT
.(((((((..(((((...(((&)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016616
GeneSymbolNME8
Binding site1649,1668
Score0.815
Seed1
Au0.515
Energy-17.1
Binding len19
Me-6.325
Phylopstem3.229627194285714
Phylopflank1.6437714579999998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure