Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGACTGCGGAGTCTGTC
..((((((((((((((.....&))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016619
GeneSymbolPLAC8
Binding site196,214
Score0.846
Seed1
Au0.471
Energy-17.4
Binding len18
Me-4.957
Phylopstem-0.532579588235294
Phylopflank0.07640713750000001
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure