Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTAAAGTGAGGGGCAGGAAGCTGGGGCTGCC
..((((((.(((((((((((.&)))))).................))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016621
GeneSymbolPHF21A
Binding site6705,6741
Score0.846
Seed1
Au0.382
Energy-22.2
Binding len36
Me-6.013
Phylopstem2.987912214285714
Phylopflank2.30312499125
Longest consecutive pairings6
Position of longest consecutive pairings30
Pairings in 3prime end7
Position3UTR
2D Structure