Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCAGGTTCGATGCCCGGGAGGCGGCGGCCGCGGCGGCGGC
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016626
GeneSymbolMEX3C
Binding site865,909
Score0.846
Seed0
Au0.206
Energy-24.2
Binding len18
Me-8.057
Phylopstem0.7623456363636364
Phylopflank2.262306820000001
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure