Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATCACTGTAGCTGTG
..(((((((((((.(((....&))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016631
GeneSymbolPAXBP1
Binding site3341,3357
Score1.0
Seed1
Au0.559
Energy-18.7
Binding len16
Me-5.814
Phylopstem2.646131090909091
Phylopflank3.3054885625000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure