Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTGCGCTGCAGC
(((((((.((((((...((((&)))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016639
GeneSymbolTNFRSF12A
Binding site220,239
Score1.0
Seed1
Au0.294
Energy-21.8
Binding len19
Me-7.22
Phylopstem-0.2709782857142857
Phylopflank0.68566636125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure