Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGCGGCCGAGCTGCGGC
((((((((.((((((((((((&))))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016642
GeneSymbolSPTBN5
Binding site2589,2611
Score0.923
Seed1
Au0.191
Energy-27.6
Binding len22
Me-4.994
Phylopstem0.7245039230769231
Phylopflank1.310618480625
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure