Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGCAGAGGCTACTGCAGCTGCAGC
(((((((((((((((((.(((&))).)))).........))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016642
GeneSymbolSPTBN5
Binding site1440,1471
Score0.923
Seed1
Au0.309
Energy-26.8
Binding len31
Me-3.938
Phylopstem0.8581780384615386
Phylopflank1.4781057437500003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure