Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGGAGCAGCTGCAGC
((((((((((..((((.((((&))))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016642
GeneSymbolSPTBN5
Binding site9502,9523
Score0.923
Seed1
Au0.294
Energy-25.7
Binding len21
Me-10.109
Phylopstem0.14086068000000002
Phylopflank1.3538967849999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure