Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCTGCAGGCCTCAGTGGAGCTGCAC
.(((((((((((((((.((((&)))))))))))))............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016642
GeneSymbolSPTBN5
Binding site4741,4773
Score0.923
Seed1
Au0.368
Energy-24.9
Binding len32
Me-3.793
Phylopstem1.6959452555555556
Phylopflank1.897058685
Longest consecutive pairings13
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure