Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCTGGGGAAACTGA
...(((((.((((((((((((&)))))))))))).))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016647
GeneSymbolTHEM6
Binding site1853,1875
Score1.0
Seed0
Au0.412
Energy-21.9
Binding len22
Me-7.571
Phylopstem-1.1453128333333333
Phylopflank-0.7077494762499998
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure