Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTTACAAGTATGCCCTGGA
.((.(((((((..((((((((.&)))))))).)))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016652
GeneSymbolCRNKL1
Binding site1333,1354
Score0.846
Seed0
Au0.588
Energy-18.7
Binding len21
Me-11.461
Phylopstem-0.21401775
Phylopflank-0.17899321750000002
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure