Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTACCGGCGGTTGCT
..(((((((((((...(((((&))))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016652
GeneSymbolCRNKL1
Binding site2121,2140
Score0.846
Seed1
Au0.515
Energy-21.0
Binding len19
Me-6.782
Phylopstem4.869306975
Phylopflank4.098555210000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure