Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCAAGACAGCTCTGAGCAGCTGTGGG
((((((((((.((((((((((&)))))))))).............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016653
GeneSymbolMAP3K20
Binding site3663,3697
Score0.923
Seed1
Au0.441
Energy-25.2
Binding len34
Me-6.762
Phylopstem1.4869682
Phylopflank1.0487177625000004
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure