Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGGCTGAGGCTGCAAT
((((((((.((((((.((((.&)))).)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016653
GeneSymbolMAP3K20
Binding site2981,3002
Score1.0
Seed1
Au0.559
Energy-22.6
Binding len21
Me-5.227
Phylopstem-0.022376000000000004
Phylopflank0.20829221
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure