Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAATAACAACAGCTGGCAT
.((((((((..(((((.(((.&))).)))))..)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016654
GeneSymbolGABPB1
Binding site3435,3456
Score0.846
Seed1
Au0.691
Energy-20.0
Binding len21
Me-7.861
Phylopstem3.710684777777778
Phylopflank4.142553787500001
Longest consecutive pairings6
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure