Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTCACATTTTGGGTGCCAGGC
.((((((((..((((((((((.&))))).)))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001354471
GeneSymbolMS4A18
Binding site893,917
Score0.846
Seed1
Au0.5
Energy-20.7
Binding len24
Me-7.861
Phylopstem0.14804127272727272
Phylopflank0.0008505757499999989
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure