Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGTAAGCAGCCTGACAGG
((((((((((..(((((((((&)))))))))...))))).)).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016732
GeneSymbolRALY
Binding site1222,1247
Score0.923
Seed1
Au0.397
Energy-22.2
Binding len25
Me-10.109
Phylopstem2.1297514166666667
Phylopflank2.2416345075
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure