Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCAGGTCTCAGTTTCCTCAGCTGTAAA
(((((((((.((..((((((.&)))))).............)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016732
GeneSymbolRALY
Binding site4367,4399
Score0.846
Seed1
Au0.574
Energy-20.8
Binding len32
Me-7.326
Phylopstem0.6642060888888889
Phylopflank0.24128110049999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure