Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGACCAGCTGCGGCTGGAGG
((.((((((((((((..((((&))))....)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016733
GeneSymbolLIMK2
Binding site997,1021
Score0.923
Seed0
Au0.309
Energy-25.9
Binding len24
Me-5.728
Phylopstem2.3617504166666667
Phylopflank2.3473774858749996
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure