Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCCGCAGCTGCT
..((((((((((..((.....&))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016733
GeneSymbolLIMK2
Binding site172,187
Score1.0
Seed1
Au0.294
Energy-23.8
Binding len15
Me-7.103
Phylopstem0.8127877600000002
Phylopflank1.39766438625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure