Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCAACACAAGGAGAAAATGCAGCTGCT
..((((((((((((((.(((.&)))..)))))............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016734
GeneSymbolPAX5
Binding site6834,6866
Score0.923
Seed1
Au0.574
Energy-22.6
Binding len32
Me-4.957
Phylopstem0.1995381807692308
Phylopflank0.5501110262500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure