Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAACAGCAGCTGTAT
.(((((((((.(((((((((.&))))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016824
GeneSymbolADD3
Binding site1046,1066
Score0.846
Seed1
Au0.544
Energy-30.0
Binding len20
Me-6.618
Phylopstem3.5416314444444446
Phylopflank4.990978033749999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure