Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCAGCCGCAGCG
.....((((((((((.(((..&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016830
GeneSymbolVAMP1
Binding site65,80
Score0.846
Seed0
Au0.309
Energy-22.4
Binding len15
Me-13.899
Phylopstem2.3352885
Phylopflank1.2165632425000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure