Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATACTGTATGCCGGC
..((((((((((.((((.....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016834
GeneSymbolMAPT
Binding site4560,4576
Score1.0
Seed1
Au0.515
Energy-17.7
Binding len16
Me-6.246
Phylopstem5.057676
Phylopflank5.0360406125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure