Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAAGCTGTGCAGCTGGGC
.(.((((((((.(((((((..&))))))).)...))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354473
GeneSymbolSERTM2
Binding site461,483
Score0.846
Seed0
Au0.529
Energy-21.7
Binding len22
Me-8.698
Phylopstem0.33440010000000003
Phylopflank0.33151395699999997
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
Position5UTR
2D Structure