Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACGACCCAACTACAGCTGCT
..(((((((.(((((((((..&)))))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016836
GeneSymbolRBMS1
Binding site1216,1239
Score0.885
Seed1
Au0.574
Energy-23.2
Binding len23
Me-6.2
Phylopstem5.761846666666667
Phylopflank4.804892099999999
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure