Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTCACTCAGCATTTCGTGAGCCCTGCTGTGTGCCAGC
..((((((((((..((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016848
GeneSymbolSHC3
Binding site4713,4754
Score0.923
Seed1
Au0.441
Energy-20.1
Binding len16
Me-7.103
Phylopstem-1.04156662
Phylopflank-0.41654020375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure