Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTGCCAGA
..(((((((...((((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016848
GeneSymbolSHC3
Binding site3161,3175
Score0.846
Seed1
Au0.471
Energy-17.5
Binding len14
Me-12.371
Phylopstem-0.6525677142857143
Phylopflank-0.33004356874999996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure