Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCGCGGCCGCCGCTGTG
..(((((.((((((((..(((&)))..)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016848
GeneSymbolSHC3
Binding site156,176
Score0.846
Seed0
Au0.265
Energy-24.5
Binding len20
Me-7.271
Phylopstem-0.014778562499999967
Phylopflank0.57637545875
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
Position5UTR
2D Structure