Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGGTGCAGCTGCAT
.((((((((((.(((...((.&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016848
GeneSymbolSHC3
Binding site8007,8024
Score1.0
Seed1
Au0.559
Energy-22.4
Binding len17
Me-7.373
Phylopstem0.4618043
Phylopflank1.975914429
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure