Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGGGTTAATTTTCCTACAATCTGACTCAACTGCCAGGTG
((((((((.......((((((.&.)))))).......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016929
GeneSymbolCLIC5
Binding site2342,2384
Score0.846
Seed1
Au0.691
Energy-18.7
Binding len23
Me-15.289
Phylopstem-0.004135872499999992
Phylopflank0.15528131600000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure