Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATTCAACTGTAGCCTGTAAT
(((((((((((((((..((((&))))....)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016929
GeneSymbolCLIC5
Binding site2202,2227
Score1.0
Seed1
Au0.5
Energy-23.6
Binding len25
Me-4.171
Phylopstem0.16672136500000007
Phylopflank-0.058969419749999974
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure