Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTTGCACTTTGAGACCAAAGGACATCATGTGTGTCAGT
..((((((((((((((......&.))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016931
GeneSymbolNOX4
Binding site2848,2888
Score0.846
Seed1
Au0.632
Energy-16.1
Binding len18
Me-4.957
Phylopstem5.0595791350625
Phylopflank4.589481830762499
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure