Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCACAACCACGCCAAGCTGCAGC
((((((((((((((((..(((&)))..))))))..))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016932
GeneSymbolSIX2
Binding site569,595
Score0.923
Seed1
Au0.382
Energy-24.0
Binding len26
Me-3.938
Phylopstem-0.37308845
Phylopflank-0.434564375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure