Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACTGCAAGTCAGAGGGCCTATGCGCCTGAGCAGCTGCAGA
((((((((((((.((((((((&.)))).))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016937
GeneSymbolPOLA1
Binding site3597,3642
Score0.885
Seed1
Au0.471
Energy-26.1
Binding len26
Me-5.227
Phylopstem5.042647666666668
Phylopflank4.602175014999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure