Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAAGTGATGACTGGAGCTGGAGG
((.(((((.(((((((.....&.))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016940
GeneSymbolRWDD2B
Binding site1533,1559
Score0.846
Seed0
Au0.515
Energy-18.0
Binding len18
Me-6.552
Phylopstem0.08404262857142857
Phylopflank-0.28002398624999997
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end3
Position3UTR
2D Structure