Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCCTGCAAAAGTAACCCAGTTGCAC
.((((((((.(((((((((((&)))))))..........)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354475
GeneSymbolCSGALNACT1
Binding site2367,2397
Score0.923
Seed1
Au0.529
Energy-20.6
Binding len30
Me-5.036
Phylopstem0.5950523428571429
Phylopflank0.80359583875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure