Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACATTCTGGTTAAACAGCTTGCT
..((((((((((.(((((((.&)))))))..)))......))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016945
GeneSymbolTAS2R16
Binding site335,362
Score0.846
Seed1
Au0.647
Energy-17.9
Binding len27
Me-6.246
Phylopstem0.5628083411764706
Phylopflank-0.23861492074999996
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure